Set parameters or Use default valuesdisregard the strand direction use linear model for genomes (default: graph model)allowing distance between two genes minimum number of genes minimum number of known family the number of strong assocation (Type 1) ≥= the number of weak assocation (Type 3) output: association type positions of strong association positions of weak association Select genomes from user database Select genomes from the list NC_000854 Aeropyrum pernix, complete genome. NC_003062 Agrobacterium tumefaciens strain C58 circular chromosome, complete NC_003063 Agrobacterium tumefaciens strain C58 linear chromosome, complete NC_003064 Agrobacterium tumefaciens strain C58 plasmid AT, complete sequence. NC_003065 Agrobacterium tumefaciens str. C58 (Cereon) plasmid Ti, complete NC_003304 Agrobacterium tumefaciens str. C58 (U. Washington) chromosome NC_003305 Agrobacterium tumefaciens str. C58 (U. Washington) chromosome NC_003306 Agrobacterium tumefaciens str. C58 (U. Washington) plasmid AT, NC_003308 Agrobacterium tumefaciens str. C58 (U. Washington) plasmid Ti, NC_000918 Aquifex aeolicus complete genome. NC_001880 Aquifex aeolicus plasmid ece1, complete sequence. NC_000917 Archaeoglobus fulgidus DSM 4304, complete genome. NC_003995 Bacillus anthracis A2012, unfinished sequence, whole genome shotgun NC_003997 Bacillus anthracis str. Ames, complete genome. NC_004722 Bacillus cereus ATCC 14579, complete genome. NC_002570 Bacillus halodurans, complete genome. NC_000964 Bacillus subtilis, complete genome. NC_000948 Borrelia burgdorferi B31 plasmid cp32-1, complete sequence. NC_000949 Borrelia burgdorferi B31 plasmid cp32-3, complete sequence. NC_000950 Borrelia burgdorferi B31 plasmid cp32-4, complete sequence. NC_000951 Borrelia burgdorferi B31 plasmid cp32-6, complete sequence. NC_000952 Borrelia burgdorferi B31 plasmid cp32-7, complete sequence. NC_000953 Borrelia burgdorferi B31 plasmid cp32-8, complete sequence. NC_000954 Borrelia burgdorferi B31 plasmid cp32-9, complete sequence. NC_000955 Borrelia burgdorferi B31 plasmid lp21, complete sequence. NC_000956 Borrelia burgdorferi B31 plasmid lp56, complete sequence. NC_000957 Borrelia burgdorferi B31 plasmid lp5, complete sequence. NC_001318 Borrelia burgdorferi, complete genome. NC_001849 Borrelia burgdorferi plasmid lp17, complete sequence. NC_001850 Borrelia burgdorferi plasmid lp25, complete sequence. NC_001851 Borrelia burgdorferi plasmid lp28-1, complete sequence. NC_001852 Borrelia burgdorferi plasmid lp28-2, complete sequence. NC_001853 Borrelia burgdorferi plasmid lp28-3, complete sequence. NC_001854 Borrelia burgdorferi plasmid lp28-4, complete sequence. NC_001855 Borrelia burgdorferi plasmid lp36, complete sequence. NC_001856 Borrelia burgdorferi plasmid lp38, complete sequence. NC_001857 Borrelia burgdorferi plasmid lp54, complete sequence. NC_001903 Borrelia burgdorferi plasmid cp26, complete sequence. NC_001904 Borrelia burgdorferi plasmid cp9, complete sequence. NC_004463 Bradyrhizobium japonicum, complete genome. NC_003317 Brucella melitensis chromosome I, complete sequence. NC_003318 Brucella melitensis chromosome II, complete sequence. NC_004310 Brucella suis 1330 chromosome I, complete sequence. NC_004311 Brucella suis 1330 chromosome II, complete sequence. NC_004061 Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. NC_002252 Buchnera sp. APS plasmid pTrp, complete sequence. NC_002253 Buchnera sp. APS plasmid pLeu, complete sequence. NC_002528 Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete NC_002163 Campylobacter jejuni subsp. jejuni NCTC 11168, complete genome. NC_002696 Caulobacter crescentus CB15, complete genome. NC_002620 Chlamydia muridarum, complete genome. NC_000117 Chlamydia trachomatis, complete genome. NC_002179 Chlamydia pneumoniae AR39, complete genome. NC_000922 Chlamydophila pneumoniae CWL029 complete genome. NC_002491 Chlamydophila pneumoniae J138, complete genome. NC_001988 Clostridium acetobutylicum plasmid pSOL1, complete sequence. NC_003030 Clostridium acetobutylicum ATCC824 complete genome. NC_003450 Corynebacterium glutamicum ATCC 13032, complete genome. NC_000958 Deinococcus radiodurans plasmid MP1, complete sequence. NC_000959 Deinococcus radiodurans plasmid CP1, complete sequence. NC_001263 Deinococcus radiodurans chromosome 1, complete sequence. NC_001264 Deinococcus radiodurans chromosome 2, complete sequence. NC_000913 Escherichia coli K12, complete genome. NC_002695 Escherichia coli O157:H7, complete genome. NC_002655 Escherichia coli O157:H7 EDL933, complete genome. NC_003454 Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete NC_000907 Haemophilus influenzae Rd, complete genome. NC_002607 Halobacterium sp. NRC-1, complete genome. NC_002608 Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. NC_000915 Helicobacter pylori 26695, complete genome. NC_000921 Helicobacter pylori, strain J99 complete genome. NC_002662 Lactococcus lactis subsp. lactis, complete genome. NC_003212 Listeria innocua Clip11262, complete genome. NC_003383 Listeria innocua plasmid pLI100, complete sequence. NC_003210 Listeria monocytogenes strain EGD, complete genome. NC_002678 Mesorhizobium loti, complete genome. NC_002679 Mesorhizobium loti plasmid pMLa, complete sequence. NC_002682 Mesorhizobium loti plasmid pMLb, complete sequence. NC_000916 Methanobacterium thermoautotrophicum str. Delta H complete genome. NC_000909 Methanococcus jannaschii complete genome. NC_001732 Methanocaldococcus jannaschii extrachrom large extra-chromosomal NC_001733 Methanocaldococcus jannaschii extrachrom small extra-chromosomal NC_003551 Methanopyrus kandleri AV19, complete genome. NC_003552 Methanosarcina acetivorans str. C2A, complete genome. NC_003901 Methanosarcina mazei strain Goe1, complete genome. NC_002677 Mycobacterium leprae strain TN complete genome. NC_002755 Mycobacterium tuberculosis CDC1551, complete genome. NC_000962 Mycobacterium tuberculosis H37Rv, complete genome. NC_000908 Mycoplasma genitalium, complete genome. NC_004432 Mycoplasma penetrans, complete genome. NC_000912 Mycoplasma pneumoniae, complete genome. NC_002771 Mycoplasma pulmonis complete genome. NC_003112 Neisseria meningitidis serogroup B strain MC58 complete genome. NC_003116 Neisseria meningitidis serogroup A strain Z2491 complete genome. NC_003240 Nostoc sp. PCC 7120 plasmid pCC7120beta, complete sequence. NC_003267 Nostoc sp. PCC 7120 plasmid pCC7120gamma, complete sequence. NC_003272 Nostoc sp. PCC 7120 complete genome. NC_003276 Nostoc sp. PCC 7120 plasmid pCC7120alpha, complete sequence. NC_002663 Pasteurella multocida, complete genome. NC_002516 Pseudomonas aeruginosa PA01, complete genome. NC_003364 Pyrobaculum aerophilum, complete genome. NC_000868 Pyrococcus abyssi, complete genome. NC_003413 Pyrococcus furiosus DSM 3638, complete genome. NC_000961 Pyrococcus horikoshii, complete genome. NC_003295 Ralstonia solanacearum, complete genome. NC_003296 Ralstonia solanacearum strain GMI1000 megaplasmid pGMI1000MP, NC_003103 Rickettsia conorii Malish 7, complete genome. NC_000963 Rickettsia prowazekii strain Madrid E, complete genome. NC_003198 Salmonella enterica subsp. enterica serovar Typhi, complete genome. NC_003384 Salmonella enterica subsp. enterica serovar Typhi plasmid pHCM1, NC_003385 Salmonella enterica subsp. enterica serovar Typhi plasmid pHCM2, NC_004631 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete NC_003197 Salmonella typhimurium LT2, complete genome. NC_003277 Salmonella typhimurium LT2 plasmid pSLT, complete sequence. NC_004337 Shigella flexneri 2a str. 301, complete genome. NC_004741 Shigella flexneri 2a str. 2457T, complete genome. NC_003037 Sinorhizobium meliloti plasmid pSymA, complete sequence. NC_003047 Sinorhizobium meliloti 1021 complete genomes. NC_003078 Sinorhizobium meliloti plasmid pSymB, complete sequence. NC_003923 Staphylococcus aureus subsp. aureus MW2, complete genome. NC_002758 Staphylococcus aureus strain Mu50, complete genome. NC_002745 Staphylococcus aureus subsp. aureus N315, complete genome. NC_004116 Streptococcus agalactiae 2603V/R, complete genome. NC_004368 Streptococcus agalactiae NEM316, complete genome. NC_004350 Streptococcus mutans UA159, complete genome. NC_003098 Streptococcus pneumoniae R6 complete genome. NC_003028 Streptococcus pneumoniae, complete genome. NC_002737 Streptococcus pyogenes, complete genome. NC_004070 Streptococcus pyogenes MGAS315, complete genome. NC_003485 Streptococcus pyogenes strain MGAS8232, complete genome. NC_004606 Streptococcus pyogenes SSI-1, complete genome. NC_002754 Sulfolobus solfataricus, complete genome. NC_005070 Synechococcus sp. WH 8102, complete genome. NC_000911 Synechocystis sp. PCC 6803, complete genome. NC_002578 Thermoplasma acidophilum, complete genome. NC_002689 Thermoplasma volcanium, complete genome. NC_000853 Thermotoga maritima, complete genome. NC_000919 Treponema pallidum subsp. pallidum str. Nichols complete genome. NC_004551 Tropheryma whipplei TW08/27, complete genome. NC_004572 Tropheryma whipplei str. Twist, complete genome. NC_002162 Ureaplasma urealyticum, complete genome. NC_004603 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete NC_004459 Vibrio vulnificus CMCP6 chromosome I, complete sequence. NC_002488 Xylella fastidiosa 9a5c, complete genome. NC_002490 Xylella fastidiosa plasmid pXF51, complete sequence. NC_004556 Xylella fastidiosa Temecula1, complete genome. NC_003131 Yersinia pestis CO92 plasmid pCD1, complete sequence. NC_003143 Yersinia pestis strain CO92, complete genome. NC_004088 Yersinia pestis KIM, complete genome. NC_001133 Saccharomyces cerevisiae chromosome I, complete chromosome NC_001134 Saccharomyces cerevisiae chromosome II, complete chromosome NC_001135 Saccharomyces cerevisiae chromosome III, complete chromosome NC_001136 Saccharomyces cerevisiae chromosome IV, complete chromosome NC_001141 Saccharomyces cerevisiae chromosome IX, complete chromosome NC_001224 Saccharomyces cerevisiae mitochondrion, complete genome. NC_001137 Saccharomyces cerevisiae chromosome V, complete chromosome NC_001138 Saccharomyces cerevisiae chromosome VI, complete chromosome NC_001139 Saccharomyces cerevisiae chromosome VII, complete chromosome NC_001140 Saccharomyces cerevisiae chromosome VIII, complete chromosome NC_001142 Saccharomyces cerevisiae chromosome X, complete chromosome NC_001143 Saccharomyces cerevisiae chromosome XI, complete chromosome NC_001144 Saccharomyces cerevisiae chromosome XII, complete chromosome NC_001145 Saccharomyces cerevisiae chromosome XIII, complete chromosome NC_001146 Saccharomyces cerevisiae chromosome XIV, complete chromosome NC_001147 Saccharomyces cerevisiae chromosome XV, complete chromosome NC_001148 Saccharomyces cerevisiae chromosome XVI, complete chromosome